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HoneyBook Payroll: Set up and pay 1099 contractors

Learn how to run or reprocess HoneyBook Payroll for 1099 contractor payments—all in one place

Updated today

HoneyBook Payroll lets U.S.-based businesses pay 1099 contractors directly from their HoneyBook account. Payroll supports only contractor payments and helps you send payments in one place, keep payroll and bookkeeping organized, and prepare for tax season with built-in reports and forms. Contractors must complete onboarding before they can be paid, but you can add and invite them any time during setup.


Important update: HoneyBook Payroll is being sunset

We’ve made the decision to sunset HoneyBook Payroll in HoneyBook, and are no longer onboarding new members. If you were using HoneyBook Payroll, the last day to run payroll will be May 31, 2026, and the last day to access payroll documents will be June 30, 2026. After June 30, 2026, payroll data and documents will no longer be available in HoneyBook.

What this means for you

  • You can continue running payroll through May 31, 2026

  • You can access and download payroll and tax documents until June 30, 2026

  • Action required: Download all payroll reports before June 30, 2026 and find your 1099 tax forms, by following the Taxes and bookkeeping section

  • Billing update:

    • You won’t be charged for Payroll moving forward

    • No action is needed to cancel or manage a subscription


Contractor setup

Get your team ready

You must add your work location before completing this step.

  • Invite contractors to enter their own information and be ready for payment

  • When you invite a contractor:

    • They receive an email titled “Set up your HoneyBook payroll account!”

    • They select Set up now and complete onboarding

    • Onboarding includes entering their legal name, tax information, and direct deposit details

    • When a contractor is paid, they receive an email confirming the payment

  • Each contractor must complete onboarding before you can submit payroll for them

📚 Tips

  • You can invite contractors even if you don’t plan to pay them right away

  • If you see a message prompting you to contact the Support team when running payroll, it usually means one or more contractors haven’t finished onboarding. Ask them to log in and complete setup before retrying.

Add or manage contractors

You can add, edit, or remove contractors any time.

Add a contractor

  1. From the navigation menu, select Finance > Payroll

  2. Select Workers list > Add worker

  3. Enter the contractor’s legal name and email address

  4. Choose one option:

    • Invite worker to enter their own info, or

    • I’ll enter the info myself if you already have their details

  5. Select Add worker

Other contractor actions

From Finance > Payroll > Workers list, select the More actions menu icon three-dot menu icon next to a contractor to:

  • Edit onboarding information

  • View associated projects

  • Assign the contractor to a project

  • Delete the contractor


Payroll management

How to pay contractors

  1. From the navigation menu, select Finance > Payroll

  2. Select Send payment

    • If a payroll is in progress, you can select Resume or Delete

  3. Select the contractors you want to pay > Next

  4. Choose the payment date

    • Optional: Select + Add work period to show what the payment covers

  5. Select Send payment

  6. On the “Hours and earnings” page, you can select the More actions menu icon three-dot menu icon next to a staff member, then select:

    • Edit pay

    • Edit deductions

    • Add memo

  7. Select Next > Submit payroll, then confirm the remaining prompts

    • If needed, you can select Cancel payroll before submission

Cancel and reprocess a payroll run

If you need to make changes after submitting payroll for your contractors, you can cancel and resubmit the payroll before the daily processing cutoff.

  1. From the navigation menu, select Finance > Payroll

  2. Find the payroll run, then select View details

  3. Select Cancel payroll and confirm the cancellation

  4. After canceling:

    1. Refresh the page. The payroll will reappear on your dashboard with the option to resume.

    2. Select Resume, make edits on the “Hours and earnings” page, and select Submit payroll again

Important timing

  • Payroll can be canceled until 8:00 pm PT on the processing day

  • You must resubmit payroll before 8:00 pm PT to avoid payment delays

  • If the payroll has already begun processing, the Cancel payroll option will no longer appear. At that point, contact our Support team to request a payroll void:

    • Select the Question Mark icon on any HoneyBook page

    • Choose Message us > Send us a message

    • Enter “Talk to a person”

  • Depending on timing, some tax payments may have already been submitted and may not be refundable

Taxes and bookkeeping

Download payroll reports

  1. From the navigation menu, select Reports

  2. Select Download report

  3. Choose a time frame, then scroll down to select Payroll

  4. Select Download

  5. You’ll receive a notification when the report is ready

Find your 1099 tax forms

  1. From the navigation menu, select Finance > Tax Hub

  2. Under “[year] tax documents,” select the year

  3. Download your 1099-K or 1099-NEC forms

Update payroll settings

From Finance > Payroll > Settings, you can select and manage:

  • Business info

  • Addresses

  • Tax info

  • Pay groups

  • Bank accounts

  • Pay types

  • Check printing settings


Still have questions? Feel free to send us a message by clicking the Question Mark icon on any HoneyBook page. Our team is always happy to help!